HQ-MAGs with Oxford Nanopore long-read #metagenomics 🐶💩🧬 assets.researchsquare.com/files/rs-60068… Preprint under revision from Anna Cuscó @prd_96 & @Quinovines

Main issues to ensure retrieval of complete single-contig HQ MAGs with long-read metagenomics: - HMW DNA extraction to improve contiguity, and - correction of the indels to reduce frameshift errors

New results from VETGENOMICS

And now accepted for publication! “The microbiota of the surface, dermis and subcutaneous tissue of dog skin” europepmc.org/article/PPR/PP… Congrats Anna Cuscó Rocio Fonticoba & Lluis Ferrer and thanks to the reviewers

1st IberION virtual KickOff meeting, supported by Oxford Nanopore 🖥️ online 🗓️ 15 december ⏰ 15-18h 💳 free attendance 📝 registration needed nanoporetech.com/events/1st-ibe… x.com/iber_ion/statu…

¿Te imaginas poder detectar las resistencias a antibióticos que portan las bacterias de un animal con un cacharrillo más pequeño que tu móvil? Pásate mañana por el webinar y descubre si es posible o si en realidad mi mano es tamaño industrial.

Seguimos subiendo en casos COVID por millón de habitantes. Con nuevas variantes más contagiosas entre nosotros que pondrán aún más presión sobre el sistema sanitario y su personal.

Good work @Quinovines Anna Cuscó @LourMigura Olga Francino Great collaboration IRTA-CReSA VETGENOMICS Universitat Autònoma de Barcelona

🐶 Staph pseudintermedius 🐶 in health and disease 61 Oxford Nanopore-only assembled genomes with >99% completeness mra.asm.org/content/10/16/… Great team @prd_96 @Quinovines Norma Fabregas Anna Cuscó @LourMigura Lluis, Rocio, Gabri, Sergi, Pieranna & Sofia #SerenaExecutors

Finally out! rdcu.be/cj87M See how we have used long-read metagenomics with Nanopore sequencing to profile a canine fecal microbiome sample and retrieve eight single-contig HQ MAGs 🐕💩🦠🧬 Daniel Pérez @Quinovines Norma Fabregas Olga Francino

Now peer-reviewed in BMC #BMCGenomics

Tesi en 4 minuts youtu.be/ueXv_UEB1oA vía YouTube Universitat Autònoma de Barcelona VETGENOMICS Facultat de Veterinària de la UAB Let’s go @Quinovines 💪🏼💪🏼💪🏼

Awesome @Quinovines like a magician pulling out a sequencer from his pocket Bacteria, antimicrobial resistance & Oxford Nanopore

Thanks to a sample donated by our good pal, @IAMCOOPER, these researchers were able to retrieve 27 HQ MAGs and identify 51 bacteriophages and their hosts with #ProxiMeta. Anna Cuscó Daniel Pérez @Quinovines Norma Fabregas Olga Francino #metagenome hubs.la/H0RHQLw0

👉Are you working on #AMR and/or #OneHealth? 👉Are you working in a clinical lab on #animal #pathogens? ✅You have this opportunity to publish your data 👉enovat.eu/opportunity-fo…

🔎 Conoce las principales enfermedades que transmiten la garrapatas, vía Fundación iO

#ICCMG Norma Fabregas VETGENOMICS From WGS to long-read RNA-seq of the skin commensal Staph pseudintermedius to discover biomarkers associated with infection in canine pyoderma Poster session An honour to be after 💫 Prof Justin O'Grady talk clinicalmetagenomics.org

I am happy to share that our last paper is finally out at Microbial Genomics Microbiology Society microbiologyresearch.org/content/journa…

(3/10) Andreu Coello, PhD shared a study evaluating ONT Midnight & short-read methods for SARS-CoV-2 WGS, finding that while both strategies yield high-quality genomes, the ONT Midnight strategy provides faster turnaround time & is more cost-effective x.com/acp_micro/stat…

Un estudio realizado en VETGENOMICS descubre una gran variabilidad genómica y presencia de genes de resistencia a antibióticos en bacterias que habitan la piel de perros sanos biotech-spain.com/es/articles/un…