TCRex is going offline at 11h CEST for some maintenance and upgrades. Be sure to download any results you want to keep. We will be back soon!

We are honored to receive this award. Thank you @roche and BlueHealth Innovation Center for supporting our research. Congratulations to the #AUDACIS consortium and the TCRex tool team. @uantwerpen @biominabe

A new version of TCRex has been released into the wild! Check out the improved and new #TCR #epitope prediction models and new features. #TCRseq #AIRRseq #immunoinformatics

The TCRex team is present at #AIRRC4. We will give a short talk and two poster presentations (nr. 102 and nr. 109). We are also giving away original TCRex stickers. Please, feel free to stop by to ask any questions and to get an overview of the latest TCRex developments.

TCRex will be offline for a short period this afternoon for a scheduled maintenance.

A new version of the TCRex web tool has been released! TCRex can now perform epitope specificity enrichment analyses on TCR repertoires. Try it out for all your favourite epitopes at tcrex.biodatamining.be.

#SaveTheDate for this year's #ATCR19 meeting on the application and use of #TCR #sequencing: 9-10 December 2019! More info coming soon: uantwerpen.be/en/projects/au… #AIRRseq #TCRseq

The TCRex tool paper demonstrating the identification of the epitope specificity of TCR repertoires using our prediction models and enrichment analysis approach has been published in Frontiers - Immunology! frontiersin.org/articles/10.33….

Building further on the great work by the groups of Mikhail Shugay and GrigoryEfimov , we created a TCR-epitope prediction model for the #SARS-CoV-2 epitope YLQPRTFLL for use in #AIRRseq data and #COVID19 studies. Check it out at tcrex.biodatamining.be! biomina UAntwerpen

TCRex version 0.3.1 has been released. It includes a number of efficiency improvements. Check it out at tcrex.biodatamining.be. More exciting updates are coming! Let us know what you are using TCRex for.

TCRex version 0.3.2 is a fact! Start using the epitope-TCR interaction prediction tool to identify epitope-specific TCRs in all your #AIRRseq data. To aid in #COVID19 research, we also added new prediction models for 46 #SARSCoV2 epitopes. Check it out at tcrex.biodatamining.be.

Registration and abstract submission for the #ATCR23 meeting next year in May is now open! Join us to discuss T-cells from a #TCR perspective. airr_community #airrseq #Immunology #immunoinformatics #immunosequencing uantwerpen.be/atcr23

Santa Claus has come early this year with a new TCRex release: version 0.3.3! It is now possible to use files in the AIRR format and upload your own background data set for bpr calculation. In addition, the first 2 models for VZV epitopes are online at tcrex.biodatamining.be

Ahead of this year's #ATCR23 meeting in Antwerp, we will be organizing a short workshop on #TCR data analysis and interpretation, using tools such as TCRex tool and ClusTCR. Free registration, but only 30 spots! uantwerpen.be/en/conferences…

Hurray! Today we reached the milestone of 100 epitope prediction models on TCRex: 93 viral and 7 cancer epitopes are currently available. Let us know which models you use and which epitopes we need to add.

Have you already heard of STEGO? It is a new R shiny application that enables the integration of TCRex predictions with single cell RNA+TCR data analyses and much more! Check it out at stegor.readthedocs.io.