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All right, all right, all right, it's that time of the year were Spring is upon us, the birds are chirping, and Oxford Oxford Nanopore gives us a tech update in #LC2024 #nanoporeconf

Nanopore is... All you need! According to Clive Brown Clive G. Brown #nanoporeconf Oxford Nanopore

Q30 simplex achieved internally by ONT. 🤯 Clive G. Brown Oxford Nanopore #nanoporeconf

Last day of Oxford Nanopore London Calling for us! But not before trying more yummy snacks🍦 Oxford Nanopore Events #nanoporeconf

Thread of photographers who patiently waited to capture the shot of a lifetime 🧵 1. Leonardo Sens (3 years)

Led by @harika_urel Helmholtz Munich PhD & Postdoc | Career Center TU München, we Helmholtz AI Vetsuisse-Fakultät Zürich Forschungszentrum Jülich | @[email protected] present first evidence that AI-based analysis of Oxford Nanopore signal data might enable viability-resolved metagenomics – completely for free! biorxiv.org/content/10.110…; a quick thread (0/3):

Op punt van vertrek in #Stellendam haven voor duikexpeditie Bruine Bank #DDNZS links op foto OW robot Reindert Nijland van Wageningen U&R voor EDNA video/foto & geluid

DNA metabarcoding reveals high diversity of fish and macrofaunal species in diets of little auks and other Arctic seabird species in Svalbard | Polar Biology; a ⁦WUR Marine⁩ paper link.springer.com/article/10.100…

Dieet jonge poolkabeljauw gevarieerder dan gedacht - ⁦WUR Marine⁩ wur.nl/nl/onderzoek-r…

Sequencing DNA on our shiny new Oxford Nanopore MinION Mk1D. Hooked up to a workstation with a RTX4080 GPU, live basecalling at SUP accuracy is easy. Can't wait to connect it to an Apple Ipad Pro instead, and take it in the field and at sea! #realrealtime #mk1d

Eerste duik expeditie Waddenzee @ddnzs op het wrak van de Vollrath Tham; bijna bigbag netten geborgen en een tiental loodjes ⁦NOB⁩ ⁦@duikeninbeeld⁩ ⁦Duiken⁩ ⁦Sportvisserij Nederland⁩ WUR Marine⁩

Preprint on "BWT construction and search at the terabase scale". We can compress 100 human genomes to 11GB in 21 hours, find SMEMs with it, do affine-gap alignment and retrieve similar local haplotypes. 7.3Tb commonly sequenced bacterial genomes ⇒ 30GB arxiv.org/abs/2409.00613

Over 5 minuten begint de première van De Wilde Noordzee. Lokatie: Caprera openluchttheater in Bloemendaal. Volgende week te zien in heel het land.

Phone screenshots are the worst. But can you tell which flow cell is the improved buffer? One needs flushing, the other is still going strong. I hope Oxford Nanopore can get these out of beta asap!

This is worth a new thread. Not quite 24 hours. 50 Gb of data with an N50 of 115kb from a single load on a flow cell. This compares with 33.4 Gb in the same time from a standard flow cell with the same library and 2 loads. These beta flow cells need to stop being beta Oxford Nanopore

Direct native RNA (no cDNA!) sequencing from Oxford Nanopore is revolutionising RNA sequencing. It already achieves 19.4 Q accuracy and can detect modifications like m6a, m5c, pseudouridine and inosine. Watch my colleague Bronya Boydon explain how it works. youtube.com/watch?v=9qiClB…

Mechazilla has caught the Super Heavy booster!

📣Excited to share that our new #paper is out! Using #eDNA #metabarcoding to detect #elasmobranchs in #OWFs in the North Sea🦈🦈 sciencedirect.com/science/articl… Reindert Nijland Oxford Nanopore