Jakob Wasserthal (@jakobwasserthal) 's Twitter Profile
Jakob Wasserthal

@jakobwasserthal

Building AI solutions for medical imaging at University Hospital Basel. Author of TotalSegmentator. Previously @mic_dkfz

ID: 1339162976

calendar_today09-04-2013 13:12:20

83 Tweet

838 Followers

312 Following

Jakob Wasserthal (@jakobwasserthal) 's Twitter Profile Photo

We published our dataset (doi.org/10.5281/zenodo…) making it the largest openly available dataset of child brain MRIs aging 0 to 36 months.

Jakob Wasserthal (@jakobwasserthal) 's Twitter Profile Photo

TotalSegmentator v2 is here: - 33 new classes - up to 32x faster runtime on CPU - improved label quality - larger training dataset (n=1559) - uses nnU-Net v2 Details: github.com/wasserth/Total…

TotalSegmentator v2 is here: 
- 33 new classes
- up to 32x faster runtime on CPU
- improved label quality 
- larger training dataset (n=1559)
- uses nnU-Net v2

Details: github.com/wasserth/Total…
Jakob Wasserthal (@jakobwasserthal) 's Twitter Profile Photo

Is the size of an organ within the norm? Our free online tool automatically calculates organ volumes from CT scans and compares them to the standard population distribution, providing a percentile ranking. Try it out: compute.totalsegmentator.com/volume-report/

Is the size of an organ within the norm? Our free online tool automatically calculates organ volumes from CT scans and compares them to the standard population distribution, providing a percentile ranking. Try it out:
compute.totalsegmentator.com/volume-report/
Jakob Wasserthal (@jakobwasserthal) 's Twitter Profile Photo

We added support for MR images to TotalSegmentator. It now segments 59 structures in MR images, regardless of sequence and contrast. code: github.com/wasserth/Total… paper: arxiv.org/abs/2405.19492 annotated dataset: doi.org/10.5281/zenodo… online tool: totalsegmentator.com

We added support for MR images to TotalSegmentator. 
It now segments 59 structures in MR images, regardless of sequence and contrast.

code: github.com/wasserth/Total…
paper: arxiv.org/abs/2405.19492
annotated dataset: doi.org/10.5281/zenodo…
online tool: totalsegmentator.com
Martin Segeroth (@msegeroth) 's Twitter Profile Photo

1) Let me introduce you to Statsmed (github.com/segemart/stats…) - We designed Statsmed for you to perform statistical analysis of medical data easily and get a fast overview of you data with python

Jakob Wasserthal (@jakobwasserthal) 's Twitter Profile Photo

We're excited to announce the biggest update to TotalSegmentator since its launch! We're adding 65 new structures, all focused on the head and neck region. Check out the new tasks: head_glands_cavities, head_muscles, headneck_bones_vessels, and headneck_muscles for more details.

Jakob Wasserthal (@jakobwasserthal) 's Twitter Profile Photo

Our paper on TotalSegmentator for MRI images was published in Radiology. paper: pubs.rsna.org/doi/10.1148/ra… code: github.com/wasserth/Total… dataset: zenodo.org/records/147107… online tool: totalsegmentator.com

Our paper on TotalSegmentator for MRI images was published in Radiology.

paper: pubs.rsna.org/doi/10.1148/ra…
code: github.com/wasserth/Total…
dataset: zenodo.org/records/147107…
online tool: totalsegmentator.com
Fabian Isensee (@fabianisensee1) 's Twitter Profile Photo

Excited to share nnInteractive: The nnU-Net moment for 3D Interactive Segmentation! Supports points, scribbles, boxes, & a new lasso prompt for full 3D masks from 2D inputs. Check it out: arxiv.org/abs/2503.08373 github.com/MIC-DKFZ/napar… mitk.org/wiki/MITK-nnIn…

Excited to share nnInteractive: The nnU-Net moment for 3D Interactive Segmentation! Supports points, scribbles, boxes, & a new lasso prompt for full 3D masks from 2D inputs. Check it out: arxiv.org/abs/2503.08373
github.com/MIC-DKFZ/napar…
mitk.org/wiki/MITK-nnIn…