Building better genome annotations across the tree of life biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

Real-time Taxonomic Characterization of Long-read Mixed-species Sequencing Samples in Sorted Motif Distance Space: Voyager biorxiv.org/cgi/content/sh… #biorxiv_bioinfo

Ready for >Q30 ONT reads? Herro error correction now supports both R9.4.1 and R10.4.1. simplex reads w/ Dominik Stanojevic Dehui Lin (CHM13 -R9.4.1) #nanopore #longreads

A multi-million-year natural experiment. Comparative genomics on a massive scale and its implications for human health academic.oup.com/emph/article/1…

Comparative Genome Viewer: whole-genome eukaryotic alignments journals.plos.org/plosbiology/ar…

A presentation by Illumina $ILMN on the XLEAP-SBS. It all started 25 years ago in Cambridge UK (Solexa).

SYNY: a pipeline to investigate and visualize collinearity between genomes biorxiv.org/content/10.110…

🌿 Looking to work with Bonsai ? (sequence indexing, paleogenomics, transcriptomics, spaced seeds,... members include Malfoy Mikаël Sаlson Camille Marchet @[email protected]) Contact us to apply to an international chair complete with a package and 8 weeks/year in France for 4 years! Please RT

Indexing All Life's Known Biological Sequences biorxiv.org/content/10.110… metagraph.ethz.ch/search

Friends, we are introducing LiftOn, a homology-based genome annotator that uses a protein-centric algorithm, considering both DNA & protein alignments to improve genome annotation lift-over 1/9 Steven Salzberg 💙💛 Mihaela Pertea Jakob Heinz Alaina Shumate, PhD Celine Alan Mao

Excited to share our recent work on annelid comparative genomics, led by Tom Lewin. Using Darwin Tree of Life data, we assembled a dataset of 23 genomes and discovered lineage-specific chromosome scrambling. 1/3 doi.org/10.1101/2024.0…

Our editors write: - Coffee genomics: Coffee history under the genomic lens rdcu.be/dIy4e - Plant evolution: Two steps beyond rdcu.be/dIy4G

Telomere-to-telomere phased genome assembly using error-corrected Simplex nanopore reads biorxiv.org/cgi/content/sh… #bioRxiv

A global initiative for ecological and evolutionary hologenomics. #microbiome #hologenomics Trends in Ecology & Evolution cell.com/trends/ecology…

Figeno, my visualization tool for genomics🎨🧬, is now published in Bioinformatics! doi.org/10.1093/bioinf… It can generate publication-quality figures for sequencing data along genomic coordinates: bigwig, HiC, Oxford Nanopore data with base modifications, and WGS with CNAs and SVs.

Our ATLASea programme team is presenting #BYTE-Sea project at JOBIM 2024 Feel free to discuss with our colleagues at poster 134 stand!

LongTREC students discussing with the coordinator AnaConesa to plan the Long-read transcriptomics workshop for the #LRUA24 in Uppsala Don't miss this event lrua2024.se/program/

HPRC is advancing our understanding of human genetics. Check out a recent publication in Bioinformatics on cutting-edge methods reshaping genomic analysis. Powerful work driving innovation and setting new standards in the field. Read more: bit.ly/3MkTkdg

Elio Raphalen, Bruno Ernande, and Luisa Metral weigh anchor! On 16 September the @Ifremer "Channel Ground Fish Survey” took onboard an ATLASea team to sample fish in the English Channel aboard the Thalassa 🐟

We made a big push towards the new version of #smudgeplot over the last few weeks. The difference is mind blowing! Interested? Join me on 18th of October at The Biodiversity Genomics Academy for the release & the first official tutorial! Registration: thebgacademy.org