Project Jupyter notebooks running in #usegalaxy and analysing the result of the 3k+ #SARSCoV2 workflow. RStudio is also available of course :) Thanks Anton Nekrutenko 🇺🇦 for presenting and Daniel Blankenberg for his awesome work in Interactive Tools.

We're pleased to share our new work on CRISPR-Cas. The CRISPRcasIdentifier clearly outperforms all other available tools on the most recent and comprehensive CRISPR-Cas classification dataset(F-score of 0.91) academic.oup.com/gigascience/ar…

NanoGalaxy: Nanopore long-read sequencing data analysis in Galaxy. Our work on bridging Oxford Nanopore and Galaxy Project, the two accessibility heavens of sequencing & data analysis, is now published: doi.org/10.1093/gigasc… Wandering Wim @shiltemann Björn Grüning Marius van den Beek

Our tool is online now. You are welcome to try it. Please tell us what do you think about it and also we would appreciate seeing your feedback to improve the tool.

We're pleased to share our new work on CRISPR-Cas.Casboundary: Automated definition of integral Cas cassettes academic.oup.com/bioinformatics… the first method for automated cassette boundary detection, Cas protein annotation and classification, which comprise single and multi-modules.

We're very happy to share our new work on CRISPR-Cas. CRISPRidentify: identification of CRISPR arrays using machine learning approach. academic.oup.com/nar/advance-ar… A data-driven approach that uses ML to detect and differentiate true arrays from false ones based on several features.

Heartfelt congratulations to Milad Miladi for successfully defending his PhD thesis last friday. He published an amazing number of papers, 12 of them with a major contribution! Check out his work here: orcid.org/0000-0002-0173… #bioinformatics #COVID19 #bioconda #RNA #usegalaxy

Today Sergei Pond will talk about "Insights from selection analysis of complete genomes and read-level data". Join us and learn more about the genetics of #SARSCoV2. ELIXIR Europe #denbi #usegalaxy

We welcome our 1080 registered trainees! Don't hesitate to ask any of the 50+ trainers from all over the world. galaxyproject.eu/posts/2021/02/… ELIXIR Europe EOSC-Life #denbi Universität Freiburg Gallantries

🦠Don't miss out on the next #COVID19 Galaxy webinar with Björn Grüning @babi2305 and Wolfgang Maier With them, you will explore the Viral Beacon and Galaxy variant workflows ➡️bit.ly/GalaxyCOVID19 Centre for Genomic Regulation (CRG) Galaxy Project de.NBI / ELIXIR-DE The GalaxyP Project #usegalaxy Universität Freiburg

de.NBI / ELIXIR-DE and RBC Freiburg backofenlab will also support the next Galaxy Project Papercuts CoFest #usegalaxy #Bioinformatics. For more information see: denbi.de/training/1194-…

And thanks to the organizers! First and foremost @hexylena and @shiltemann! What a great event!

A new #usegalaxy tool suite from backofenlab for chimeric RNAs associated with specific cancer types. ChiRA: an integrated framework for chimeric read analysis from RNA-RNA interactome and RNA structurome data doi.org/10.1093/gigasc…

Are you interested in developing an online data analysis game in the context of Street Science Community? This student position is for you, apply now! #streetscience #CitizenScience #OpenScience

Exciting news, our preprint about predicting #ORF in bacteria from #Ribo-seq data is available. Great collab: Rick Gelhausen, @SarahLSvensson, Omer Alkhnbashi, Sharma Lab, @eggtron, backofenlab biorxiv.org/content/10.110… github.com/RickGelhausen/… #proteins #benchmark #Bioinformatics #SPP2002

We're delighted to share our new work on CRISPR-Cas. CRISPRloci: comprehensive and accurate annotation of CRISPR–Cas systems academic.oup.com/nar/advance-ar…

Day #2 of the #DFG SPP2002 conference in Kiel. 🙂This morning Lydia Hadjeras, PhD from our group will present our joint Z-project with backofenlab on ribosome profiling and bioinformatics approaches for global sORF identification.