Derek Wang, one of our talented BD2K-LINCS DCIC 2022 summer scholars developed #CellShooter cell-shooter.dev.maayanlab.cloud An interactive viewer to discover #targets & #drugs for clusters of patients & single cells with LINCS Program data. Presentation: youtu.be/01chm8-c7-Y Ma'ayan Lab

Learn how Hannah Qu, one of our talented BD2K-LINCS DCIC 2022 summer scholars updated the #ChEA gene set library for #Enrichr maayanlab.cloud/Enrichr/. You can download the updated library from: maayanlab.cloud/Enrichr/geneSe… Presentation: youtube.com/watch?v=BaWMVB… Ma'ayan Lab

In this presentation "Benchmarking Methods to Produce #L1000 Consensus Signatures" youtu.be/8u25oN_nNuo Sophia Colmenares, an undergrad Princeton University, describes her summer research project with the Ma'ayan Lab BD2K-LINCS DCIC at Icahn School of Medicine at Mount Sinai. #bioinformatics #STEMeducation

I have lately been obsessed with some of the tools created by AviMaayan Ma'ayan Lab BD2K-LINCS DCIC . Thank you l!!! #opensource #bioinformatics #Enrichr

Talk #IonChannels, #GProtein, #Kinases, #Kinome and #NetworkPharmacology #GPCR & more at the Understudied Druggable Proteome Conf. 6/4-8. #UDPSRC Abstracts Due: 4/2 Info & Reg: bit.ly/3XPT8Xk Students: $150 off Organizers: Dr. Michael McManus, Henry Colecraft, AviMaayan

The Common Fund is seeking applications to funding opportunitites regarding #diversity, #FAIRData, #CloudComputing, and #BiomedicalResearch that make use of publicly available data resources. Check out the current opportunities: commonfund.nih.gov/dataecosystem/…

With this feature, that the Ma'ayan Lab just added to #Enrichr maayanlab.cloud/Enrichr/#metad…, you can now search for any term, and then download selected gene sets that contain to the search term in their annotation string. #Bioinformatics #Omics #DataMining #BiomedicalResearch #BigData

Amadori et al. show that plasma from patients with #atherosclerosis triggers unique inflammatory signaling in PBMNCs, which were used for selecting #drugs that may be repurposed for cardiovascular #immunotherapies|Chiara Giannarelli Letizia Amadori NYU CVRC nature.com/articles/s4416…

Last month we welcomed the 2023 cohort of 12 talented undergraduates into our lab for 10-weeks as part of our Summer Research Training Program in Biomedical Big #DataScience labs.icahn.mssm.edu/maayanlab/summ…

Data scientists at Icahn School of Medicine at Mount Sinai and colleagues have created an #ArtificialIntelligence model that may more accurately predict which existing #medicines, not currently classified as harmful, may, in fact, lead to congenital disabilities: mshs.co/3rxxJr0

💡 NEW RESEARCH Communications Medicine - Evangelista et al. construct ReproTox-KG, a #toxicology knowledge graph for exploring the link between drugs, genes & structural birth defects | Ma'ayan Lab AviMaayan Common Fund Data Ecosystem nature.com/articles/s4385…

Join the Ma'ayan Lab Virtual Symposium 8/10 @ 10 AM ET where our trainees in the Summer Undergraduate Research Training Program in Biomedical Big #DataScience will present their research projects. Register: mssm.zoom.us/webinar/regist… #STEM #Bioinformatics #SystemsBiology #DataMining

Summer Research Training Program in Biomedical Big #DataScience in the Ma'ayan Lab Icahn School of Medicine at Mount Sinai ACCEPTING APPLICATIONS FOR SUMMER SESSION 2024 | Application deadline Feb 1 labs.icahn.mssm.edu/maayanlab/summ…

On Friday 5/31 @ 1 PM ET, members of the CFDE Workbench will introduce new tools to query the LINCS Program L1000 data and gene expression signatures automatically extracted from NCBI #GEO rummageo.com register: cfde.info

A great talk by AviMaayan and his team on Tuesday at the Mount Sinai Genetics WIP in Computational Biology and Data Science, showcasing their excellent new bioinformatic interfaces, including Rummagene and others.

Join us on Tuesday, June 25th at 1:00 PM ET for a virtual workshop introducing the Playbook Workflow Builder: playbook-workflow-builder.cloud, a new #bioinformatics platform to interactively create #workflows with no coding skills. Registration: mssm.zoom.us/webinar/regist… #genomics #omics

Join our Virtual Symposium in Big #DataScience on 8/8 @ 10 AM ET where the Ma'ayan Lab trainees in the 2024 Summer Undergraduate Research Training Program in Biomedical Big #DataScience will present their research projects. Register: mountsinai.zoom.us/webinar/regist…

The Summer Research Training Program in Biomedical Big #DataScience in the Ma'ayan Lab Icahn School of Medicine at Mount Sinai is accepting applications for summer session 2025! Application deadline is Feb 1. Program details: labs.icahn.mssm.edu/maayanlab/summ…

Join us on Thursday, January 23 at 2:00 PM ET for a virtual seminar featuring GeneSetCart, a web application for multi-omics AI-driven gene set analysis. Please register in advance for this virtual seminar: maayanlab.cloud/turl/6660bf4c

Join us on Thursday, February 27 at 2:00 PM ET for a virtual seminar featuring ARCHS4, a web resource that streamlines access to over two million uniformly aligned RNA-seq samples from GEO. Please register in advance: maayanlab.cloud/turl/a60f13d9