
Panchenko lab
@annapanchenko13
Computational biology and biophysics @queensu, #epigenetics, #nucleosomes, #chromatin, #cancer.
ID: 1327777514807308289
https://panchenko-lab.org/ 15-11-2020 00:57:34
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✨Please joins us for the Biophysical Society MGO Subgroup sponsored webinar on Tue Aug 1st at 12pm ET for two great talks!✨ Multiscale Genome Organisation Bin Zhang Kazuhiro Maeshima 👇 Register at tinyurl.com/3pvytb2s


Read my latest #research [authors.elsevier.com/c/1hUDz3PA3sV0…] on #Chromatin, #Genome, #Simulation, #HiC, #reconstruction, #Mesoscale, #Genes, #Modeling, #Methods, #Multiscale, published with Co Conscious Birth in Elsevier Tamar schlick




Interested in the genome and attending #bps24? Join the MGO subroup and attend our symposium on Saturday which includes talks by Mario Halic HalicLab Emma Morrison Emma Morrison Alexey Shaytan Alexey Shaytan Remo Rohs Remo Rohs biophysics.org/store/products…

POLE variants promote genome-wide mutations in polypurine tracts - check out our paper by Daria Ostroverkhova in collaboration with Polina Shcherbakova's lab cell.com/cell-reports/f…



Our work on the identification of new pioneer transcription factors is out, in collaboration with Yunhui Peng David Landsman Teif Lab elifesciences.org/articles/88936

Happy to share this just out in eLife (full text to follow soon) 👇This was a really great collaboration with EpiCypher, Inc. and very excited about the results! CU Anschutz Medical Campus Department of Biochemistry and Molecular Biology

Excited to present the first ageing clock based on nucleosomics of cell-free DNA (cfDNA)! onlinelibrary.wiley.com/doi/10.1111/ac… ✅ Nucleosome repeat length increases with age ✅ Can predict age with ~3 year precision Congrats to Mariya Shtumpf, nrnflowers, Mila Bikova, Hulkar_M, Lumi Ruje!




Check out a short paper by Daria Ostroverkhova and Yiru Sheng on pathogenicity predictors and their applicability to cancer: sciencedirect.com/science/articl…

Nice to see our manuscript on bacterial histone HBb from Bdellovibrio online: academic.oup.com/nar/advance-ar… Different from eukaryotic/archaeal histones, HBb binds and bends DNA as dimer. With Birte Hernandez Alvarez, Vikram Alva , Yimin Hu, @SammyBoterhammy , @MPI_Bio , Leiden Science

Journal cover Nucleic Acids Res highlights our new method, RNAscape, for mapping base pairing and tertiary interactions in RNA structure: academic.oup.com/nar/article/52…. Same NAR issue features our new deep learning method to predict DNA shape: academic.oup.com/nar/article/52… USC Dornsife College of Letters, Arts & Sciences USC Research



