Josipa Lipovac
@josipalipovac
PhD student at Faculty of Electrical Engineering and Computing, University of Zagreb | Bioinformatics | Genome and metagenome assembly | ML
ID: 1484503894902333440
21-01-2022 12:31:43
32 Tweet
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The assembly-first, then mapping approach works surprisingly fast for microbial classification, especially with large databases. It's accurate, too! Great work from Josipa Lipovac!!
Our RiNALMo RNA language model has been published in Nat Comm nature.com/articles/s4146… Great work by Rafael Josip Penić and Tin Vlašić, with support and patience in teaching us RNA biology from Roland G Huber and Yue Wan RiNALMo is already an SOTA as a benchmark for RNA LLMs.
I am happy to introduce Campolina, a deep neural framework that replaces traditional algorithmic approaches for nanopore signal segmentation and improves segmentation quality for real-time analysis. Preprint and details in the thread👇 K. Friganovic, Bryan Hooi, Mile Sikic 1/7
