We are happy to announce the new SG-NEx data release v0.5.1, including a RNA004 sample in our data. Check out the release details here: github.com/GoekeLab/sg-ne… and the preprint that describes the resource here:doi.org/10.1101/2021.0…

Very excited to announce 'Uncalled4 improves nanopore DNA and RNA modification detection via fast and accurate signal alignment' by Sam Kovaka et al. biorxiv.org/content/10.110…

improved segmentation leads to more accurate m6A detection (using m6Anet here) with support for the m6Anet format

Mariela Cortés López Ming "Tommy" Tang you can also check out Jonathan Göke lab’s curated list github.com/GoekeLab/aweso…

Great news, very well deserved. There is still a lot to discover about RNA modifications, very happy to contribute to this field using our methods for Oxford Nanopore direct RNA sequencing

As usual the transcriptomics session is packed at #nanoporeconf Singapore. We probably need a larger room next year. Go RNA go !

Very happy to present our work on m6anet and single molecule m6a detection from direct RNA seq data at #nanoporeconf in Singapore! Here is the link to the paper:
doi.org/10.1038/s41592…
And repository: github.com/GoekeLab/m6anet

RNA modifications can form an additional layer of complexity in the transcriptome.

At NCM 2023 Singapore, Jonathan Göke will discuss direct RNA nanopore sequencing to capture, identify & quantify these RNA modifications. Find out more: bit.ly/3QyNs3x #naoporeconf

Pleased to report the very first paper from my research group at WEHI is now up on bioRxiv. Flexiplex is a new tool for raw sequencing data that allowed you to identify and error correct barcodes, and can even be used as a general 'grep-like' search tool.

You can still register (free) for the virtual Epitranscriptomcis symposium next week: epitranscriptomics2023.org I will talk about our work on Oxford Nanopore direct RNA-Seq data nature.com/articles/s4159… (including an update on RNA004)