Deep Visual Proteomics out in Nature Biotechnology! A new approach for #spatialomics for cell type and state-specific deep proteomes in native FFPE tissue. Fantastic team effort between CPRatUCPH @fabiancoscia Max Planck Institute of Biochemistry (MPIB) Peter Horvath Single-Cell Technologies Emma Lundberg. rdcu.be/cNU70

How can you quantify 7,000 proteins or 35,000 phosphosites in 21 min? We use optimal dia-PASEF methods generated with py_diAID and deep libraries. #proteomics #phosphoproteomics Bruker #massspec Read more in our preprint out now on bioRxiv at biorxiv.org/cgi/content/sh…

Our optimal dia-PASEF workflow is out in Molecular & Cellular Proteomics! Learn more about how we quantified 7,000 proteins and 35,000 Class I phosphosites in 21 minutes. Thanks to BrukerMassSpec, Evosep and all authors! doi.org/10.1016/j.mcpr…

📢CPH Bioscience Snapshot on Sept 20! The Proteome, Version 2.0: Time to take PTMs (even more) seriously - talk by Lennart Martens CompOmics + workshop🧬🤯👨‍💻 Organized by CPH Bioscience PhD students incl. Mikaela Koutrouli Sonja Kabatnik Charu Jain Ricardo Hernández Medina tilmeld.dk/cph-bioscience…

CPH Bioscience PhD PhD students on the CPRatUCPH CPR retreat in Skodsborg🇩🇰👩🏼‍🔬😍 Maria Metelova 🇺🇦 Victor Klein De Sousa Frederik Post Ricardo Hernández Medina Andrés Kaufmann Charu Jain Francisco Tenjo-Castaño Sonja Kabatnik Anastasia Kurzyukova

It was so much fun to present my PhD project to this broad community of MS and spatial proteomics enthusiasts! Got amazing feedback - so thanks to Human Proteome for giving me a spot in this talk session.

It does pay off! 🌱 In the past year, we have all learned how to plan and perform experiments in a sustainable manner. Looking forward to continue learning and to reach Silver 🥈

Exciting news! AlphaPeptStats is out in bioRxiv Explore our inclusive #Python package for robust, transparent and streamlined analysis of MS-based proteomics data with modular functionalities, statistical algorithms and rigorous testing. biorxiv.org/content/10.110…

Tremendously sad day for Danish science as Novo Nordisk Foundation is closing its flagship protein research institute, arguably the best in the world. CPRatUCPH has been a beacon of science and progress for years. Let's cherish the remaining years & strive to continue the legacy.

Ubiquitylation occurs broadly in the cell. Have you wondered about the occupancy and dynamics of individual sites on your favorite protein? In our preprint, we present the first proteome-scale, integrated view of ubiquitylation site occupancy and dynamics. biorxiv.org/content/10.110…

Streamline your downstream #proteomics data analysis with our new package just out in Bioinformatics. Automated, scalable results using just a few lines of #Python code. One-click installer and GUI included. All code is #opensource Streamlit Max Strauss academic.oup.com/bioinformatics…

Back to the roots 👩🏼‍🔬 Looking forward to the ‘Proteomics in Cell Biology and Disease Mechanisms’ conference at EMBL and presenting my poster on how I applied #DVP to a single cancer patient. Aiming for personalized treatment here 🙋🏼‍♀️

Big leap in single-cell proteomics! With Cellenion , Evosep & Thermo Fisher , we're pushing boundaries with a nearly lossless label free method. Our workflow reveals >5000 proteins and ~40,000 peptides per HeLa cell, setting new standards in SCP! biorxiv.org/content/10.110…

Thrilled about our latest video that gives a hilarious spin to sustainability for scientists and students! Brainstorming and planning with CPR Goes Green was a blast! 🌍🌱♻️

Great to see it uploaded on bioRxiv! DVP of the human colon mucosa and organoids🧫🔬Once transplanted, we can observe an in vivo-like phenotype switch!

Well deserved :)